A boat at a cave mouth in the cliff

Comino, Malta

Crystal Lagoon Comino: A Quieter Bay Next Door

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The essentials

  • Crystal Lagoon sits on the same Comino coast as the Blue Lagoon, in a smaller, rock-ringed inlet where the water is shallow and clear over pale sand.[1]
  • The scheduled Comino ferry from Mġarr on Gozo and Ċirkewwa on Malta lands at the Blue Lagoon, with a crossing of approximately 15 minutes each way, and the rest of the island is walked.[2]
  • Sea temperature at nearby Sliema is warmest in August at about 26.1°C and coldest in February at about 15.4°C.[3] Malta gets almost 3000 hours of sunshine a year.[4]
  • The Santa Maria Caves consist of five caves on Comino, and the cliffs above hold the Yelkouan shearwater, with around 150-220 pairs estimated on Kemmuna.[5][6]
  • The private boat tour of the Blue Lagoon, Comino and Gozo starts from US$195 and runs 2 to 4 hours, with free cancellation up to 24 hours in advance.[7]

Scores for the private boat tour

5.0 117 travellers
Rating 5.0
Reviews 5.0

These are GetYourGuide scores for the tour booked from this site, the private boat tour to the Blue Lagoon, Comino and Gozo with swim stops.

The Santa Maria Caves consist of five caves located on the island of Comino, one of the Maltese islands in the Mediterranean Sea.
Visit Blue Lagoon Malta Destination guidewww.visitbluelagoonmalta.com

Crystal Lagoon: add it to a Comino boat day

Swimming shallow entry over sand, with rock walls close by for snorkelling
Crowds calmer than the Blue Lagoon side, and best reached by boat or on foot
Timing mornings and late afternoons give calmer water and softer light
Booking free cancellation gives you room to move the day if the weather turns

Booking tips

  • Choose a trip that lists Crystal Lagoon separately from the Blue Lagoon
  • Allow a half day for one lagoon and a full day for both plus the caves
  • Private boat from US$195, group tours from US$35[7][10]
  • Reserve now and pay later, with free cancellation up to 24 hours in advance[7]

On the water

  • Sun cream, hat and plenty of water; the limestone gives almost no shade
  • Sea about 26.1°C in August and about 15.4°C in February at nearby Sliema[3]
  • Comino is a bird sanctuary, nature reserve and Natura 2000 marine protected area[11]
  • Wear shoes with grip for the rocky paths between the bays

Two lagoons, side by side

Comino is a small, bare limestone island in the channel between Malta and Gozo, and almost every boat that visits it makes for the same place: the Blue Lagoon, the shallow channel of pale water between Comino and the little islet of Cominotto. Crystal Lagoon lies on the same stretch of coastline, inside a curve of rock, and it is where skippers take swimmers who want a second, calmer stop.

The colour is the same trick of light in both bays. The Blue Lagoon's turquoise comes from light reflecting back up through shallow, clear water from the white sand below.[1] Crystal Lagoon has the same bright floor and the same clear water, but the inlet is tighter, hemmed in by low limestone ledges and boulders that drop into the sea on the outside.

Swim a few strokes out and you are over sand. Swim along the edge and the rock is close enough to touch, with small fish hanging around the weed and the shaded corners. Inside the inlet the surface is usually calm, while the open sea beyond the rocks is a different world of chop and swell. That contrast is what makes the bay feel like a pool rather than open coast.

Why Crystal Lagoon feels quieter

The Blue Lagoon carries the weight of Comino's visitors. In peak summer, in July and August, Comino's Blue Lagoon receives between 2,500 and 3,500 visitors per day.[12] Ferries, catamarans, cruises and private boats all converge on that one pale channel, and by mid-morning it looks like a car park on water.

Crystal Lagoon does not have that traffic. The scheduled Comino ferry from Mġarr on Gozo and Ċirkewwa on Malta lands at the Blue Lagoon, with a crossing of approximately 15 minutes each way.[2] To swim at Crystal Lagoon you arrive on a boat trip or a private charter, or you walk over from the Blue Lagoon side of the island.

It also sits differently in the landscape. The Blue Lagoon is a wide, open channel. Crystal Lagoon is a pocket, hidden behind the rocks until you are almost inside it. Boats come and go rather than settling for the day, and the bay can be busy at noon and empty an hour later.

Boats moored under a cliff with a cave behind

Turquoise water over pale sand in a rock-ringed inlet on Comino's coast.

What it is actually like

You usually arrive from the sea. The boat noses through a gap in the rock wall and the bay opens up in front of you: a scoop of bright water with a sandy bottom, a low cliff on the far side and a jumble of boulders where the limestone has cracked away. There is no promenade and no pier, just rock, water and the noise of an outboard ticking over.

Swimming here is easy. The water is shallow over sand close to the shore, deepens gradually and stays clear enough to see your own feet, which suits nervous swimmers and children with an adult beside them. Snorkellers should hug the rock walls and the shaded corners where the fish gather. Strong swimmers can head out towards the swell beyond the inlet, but the calm water is the point.

Water temperature swings a lot between seasons. In nearby Sliema the sea is warmest in August at about 26.1°C and coldest in February at about 15.4°C.[3] Air temperatures follow the same curve: the daily mean in Malta ranges from 12.6°C in February to 27.5°C in August, with an annual average of 19.5°C, based on 1991 to 2020 climate data for Valletta.[13] Malta also gets almost 3000 hours of sunshine a year, making it the sunniest country in Europe.[4]

Can you reach Crystal Lagoon without a boat

You can walk there, if the ferry has already brought you to the island. The crossing from Mġarr and Ċirkewwa to the Blue Lagoon takes approximately 15 minutes each way.[2] From the Blue Lagoon side, rough paths cross the limestone towards Crystal Lagoon on the western coast, with the Santa Marija Tower and Santa Maria Bay along the way.

The walk is short but not smooth. Expect uneven rock, loose stones, low scrub and almost no shade, so carry water, wear shoes with grip and start early in summer. Comino is tiny and sparsely built, so there is little to interrupt you between one bay and the next, and the quiet is part of the day.

The other way in is by boat. The private boat tour of the Blue Lagoon, Comino and the sea caves starts from US$195 for the group, runs 2 to 4 hours, includes swim stops, has a live guide in English, wheelchair access, a separate entrance that skips the line, free cancellation up to 24 hours in advance and the option to reserve now and pay later.[7] A catamaran trip to the Blue Lagoon, beaches and bays is from US$63 and takes 5 to 6 hours.[8] A cruise to Comino, the Crystal Lagoon and the Blue Lagoon is from US$40 and runs 5.5 to 7.5 hours.[9]

from US$195

The private boat tour to the Blue Lagoon, Comino and Gozo is rated 4.98 from 117 reviews and runs 2 to 4 hours.[7]

The Santa Maria Caves

The Santa Maria Caves consist of five caves located on the island of Comino.[5] They open out of the cliffs near Santa Maria Bay, and boat trips on this coast put the bay and the sea caves on the route, slowing down so passengers can look at the rock arches, the dark entrances and the colour of the water inside.

Comino is a bird sanctuary and nature reserve, a Natura 2000 marine protected area.[11] Its cliffs are home to the Yelkouan shearwater, with around 150-220 pairs estimated to nest on Kemmuna.[6] Keep your distance from nesting ledges, keep your voice down near the rock, and leave the caves alone while the birds are breeding.

On the skyline above the water, Santa Marija Tower is a defensive structure built in the 17th century as part of the Knights of St John's fortification efforts, completed in 1618 during the reign of Grand Master Alof de Wignacourt.[14] It is an easy add-on to a boat day or a walk, and it gives you a landmark to steer by when the coastline starts to look the same in every direction.

Fitting Crystal Lagoon into a trip

The simplest plan is a trip that stops at both bays. This is the classic Blue Lagoon and Crystal Lagoon, Malta day out, with two swims and the sea caves in between. Read the itinerary before you book: the routes that include Crystal Lagoon list it separately from the Blue Lagoon, and some put Santa Maria Bay, Elephant Rock or the sea caves in between.

Half a day suits one long swim and a look at the caves. A full day gives you the Blue Lagoon, Crystal Lagoon, the cliffs and a stretch of Gozo. A Gozo and Comino islands tour covering the Blue Lagoon and the sea caves is from US$35 and runs 7 hours.[10] A private boat charter with a group of your own is from US$195 and runs 2 to 4 hours.[7]

Timing matters. Ferry and tour boats run through the middle of the day, and the Blue Lagoon takes between 2,500 and 3,500 visitors per day in July and August.[12] Early departures and late afternoon trips get calmer water and softer light, and the private boat tour can be reserved now and paid for later, with free cancellation up to 24 hours in advance.[7]

A note on names

Crystal Lagoon and Blue Lagoon are two separate bays on the same island. A route that lists both is not padding its itinerary. You really do stop twice, in different water, with a different depth, a different outlook and a different set of neighbours on the rocks.

In Maltese, Comino is Kemmuna, and the island's official population is 4.[15] You will also see Cominotto, the islet beside the Blue Lagoon, named on some routes, and Santa Maria Caves used as the catch-all name for the sea caves on this stretch of coast.

Whatever you call them, these are protected places. Comino is a bird sanctuary and nature reserve, a Natura 2000 marine protected area.[11] The Blue Lagoon has also appeared as a film location in several big-screen productions.[16] Take your litter back with you, leave the seagrass and rock pools alone, and give the cliff-nesting birds room.

Daily mean air temperature in Malta

February 12.6°C
August 27.5°C
Annual average 19.5°C

Daily mean air temperatures for Valletta, Malta, based on 1991 to 2020 climate data.[13]

What the boat trips cost

From prices in US dollars for the private boat tour, the Comino cruise, the catamaran trip and the Gozo and Comino islands tour.[7][8][9][10]

Private boat with swim stopsUS$390
Comino Crystal Lagoon and Blue Lagoon cruiseUS$80
Catamaran to Blue Lagoon and baysUS$126
Gozo and Comino with sea cavesUS$70

When to swim at Crystal Lagoon

July and AugustPeak season at the Blue Lagoon, with between 2,500 and 3,500 visitors per day, so book early.[12]
May, June, SeptemberWarm sea and lighter crowds; the sea at nearby Sliema is warmest in August at about 26.1°C.[3]
October and NovemberCooler water and quiet boats; the sea at Sliema is coldest in February at about 15.4°C.[3]
December to MarchThe off season for swimming, with the daily mean air temperature in Malta at its lowest, 12.6°C in February.[13]

Planning your lagoon day

  1. Decide what you want from the day

    One long swim at Crystal Lagoon, or a full circuit of the Blue Lagoon, the caves and Gozo. That choice picks the trip for you.

  2. Pick a route that lists both bays

    Check the stops. Trips that name Crystal Lagoon separately from the Blue Lagoon give you two swims instead of one.[9]

  3. Go early or late in the day

    Midday brings the ferry crowds to the Blue Lagoon and full moorings everywhere. Morning and late afternoon are calmer.

  4. Pack for hot limestone

    Water, sun cream, a hat, shoes with grip and a bag for litter. Shade is scarce and the rock holds the heat.

  5. Leave the reserve as you found it

    Comino is a Natura 2000 marine protected area and a bird sanctuary, so keep off nesting ledges and take everything home.[11]

Swim both lagoons on a private boat

Book private boat

from US$195Reserve now & pay later

Quick answers

Can you swim at Crystal Lagoon?
Yes. The inlet is shallow over sand close to the shore and deepens gradually, so it suits casual swimmers and children with an adult beside them. Snorkelling is best along the rock walls.
How do you get to Crystal Lagoon?
Most people arrive by boat, on a trip or a private charter. You can also take the ferry to the Blue Lagoon, a crossing of approximately 15 minutes each way, and walk across.[2]
Is Crystal Lagoon quieter than the Blue Lagoon?
In peak summer, in July and August, the Blue Lagoon receives between 2,500 and 3,500 visitors per day.[12] Crystal Lagoon is smaller, enclosed by rock and reached mainly by boat.
What are the Santa Maria Caves?
The Santa Maria Caves consist of five caves on Comino, opening out of the cliffs near Santa Maria Bay. Boat trips along this coast pass them. Keep a respectful distance.[5]
Do boat tours stop at Crystal Lagoon?
Several do. The Comino, Crystal Lagoon and Blue Lagoon cruise stops at both bays, from US$40, and runs 5.5 to 7.5 hours.[9]
What should you bring to Crystal Lagoon?
Water, sun cream, a hat and shoes with grip for the rocky paths. The limestone holds the heat, shade is scarce, and Malta gets almost 3000 hours of sunshine a year.[4]
When is the sea warmest at Comino?
In nearby Sliema the sea is warmest in August at about 26.1°C and coldest in February at about 15.4°C.[3]

Records

Bibliography

  1. [Blue Lagoon Malta - The Complete Guide 2026].

    Outdoor Explorers Malta18 September 2026

    outdoorexplorersmalta.com/blue-lagoon-malta-complete-guide-2026/
    ↩
  2. [Comino Ferry | Ebsons Comino Ferries].

    Ebsons Comino Ferries18 September 2026

    cominoferryservice.com/comino-ferry/
    ↩
  3. [Sliema Sea Temperature Today | Malta].

    seatemperature.org18 September 2026

    seatemperature.org/europe/malta/sliema.htm
    ↩
  4. [Malta Weather, Climate and Seasons].

    Malta Paradise (maltaParadise)18 September 2026

    maltaparadise.com/articles/malta-climate-and-seasons/
    ↩
  5. [Santa Maria Caves | Visit Blue Lagoon Malta].

    Visit Blue Lagoon Malta18 September 2026

    visitbluelagoonmalta.com/attractions/santa-maria-caves/
    ↩
  6. [Yelkouan shearwaters - Kemmuna’s best kept secret].

    Friends Of the Earth Malta18 September 2026

    foemalta.org/blog/yelkouanshearwaters/
    ↩
  7. [Private boat tour Malta: Bluelagoon Comino Gozo & Sea Caves with swim stops].

    GetYourGuide2 August 2026

    getyourguide.com/comino-l117490/serenityboatchartersmalta-bluelagooncominogozosea-caves-t712027/
    ↩
  8. [Malta: Blue Lagoon, Beaches & Bays Trip by Catamaran].

    GetYourGuide2 August 2026

    getyourguide.com/bugibba-l117570/malta-blue-lagoon-beaches-bays-trip-by-catamaran-t398257/
    ↩
  9. [Comino: Blue Lagoon, Crystal Lagoon and Sea Caves].

    GetYourGuide4 August 2026

    getyourguide.com/sliema-l117585/from-sliema-comino-crystal-lagoon-and-blue-lagoon-cruise-t463416/
    ↩
  10. [Malta: Gozo & Comino Islands, Blue Lagoon & Seacaves Tour].

    GetYourGuide4 August 2026

    getyourguide.com/malta-l90/malta-gozo-comino-islands-blue-lagoon-seacaves-tour-t197872/
    ↩
  11. [Comino - Openwaterpedia].

    Openwaterpedia18 September 2026

    openwaterpedia.com/wiki/Comino
    ↩
  12. [Blue Lagoon Malta overcrowding 2026: honest truth, best times, real alternatives].

    Malta Spirit18 September 2026

    malta-spirit.com/guides/blue-lagoon-overcrowding-honest-truth/
    ↩
  13. [The Climate of Malta].

    Blue Green Atlas18 September 2026

    bluegreenatlas.com/climate/malta_climate.html
    ↩
  14. [Santa Marija Tower: A Historical Gem in Comino].

    Bluewaves Watersports18 September 2026

    ferrytocomino.com/about-comino/santa-marija-tower-in-comino/
    ↩
  15. [Ghajnsielem.com - Island of Comino].

    Ghajnsielem.com18 September 2026

    ghajnsielem.com/places/comino.html
    ↩
  16. [10 Malta Filming Locations That Belong on Your Next Trip].

    AFAR18 September 2026

    afar.com/magazine/visit-these-malta-filming-locations-from-tv-movie-hits
    ↩
Aerial of the lagoon crowded with boats

5.0(117)

Bluelagoon Comino Gozo & Sea Caves with swim stops Check availabilityfrom US$195